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Microchip USB B'loader with non-Microchip compiled program - SparkFun Electronics

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Has anyone successfully created a program using a non-Microchip C-compiler, but put it onto a chip containing Microchip's USB Bootloader? I think the only thing you'd need to account for is having the code skip past the boot sector; how to do that is compiler-specific, but wondered if anyone has done this.